MolNFT v1 · #148260 · protein
Structure of a talaromyces pinophilus GH62 arabinofuranosidase in complex with aradnj at 1.25A resolution
6F1J: “Structure of a talaromyces pinophilus GH62 arabinofuranosidase in complex with aradnj at 1.25A resolution”. X-ray diffraction, 3 ligands (EDG, CA, ZN). MolNFT v1 #148260 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6F1J
- Type
- protein
- Length
- 603 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- EDG, CA, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 301 | — | — |
| B | — | protein | 302 | — | — |
Ligands and binding sites
- EDG · 1,4-dideoxy-1,4-imino-L-arabinitol · ligand · 2 copies · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
- ZN · Zinc ion · metal · 2 copies · chains A, B
- PEG · Di(hydroxyethyl)ether · additive · 4 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6F1J · Structure of a Talaromyces pinophilus GH62 Arabinofuranosidase in complex with AraDNJ at… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6F1J · PDBe 6F1J
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