MolNFT v1 · #148006 · protein

Crystal structure of tannerella forsythia apo hmuy analog (tfo)

6EU8 · Putative heme binding protein: “Crystal structure of tannerella forsythia apo hmuy analog (tfo)”. X-ray diffraction, 2 pockets (best druggability 0.43). MolNFT v1 #148006 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6EU8
Type: protein
Length: 192 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative heme binding protein
UniProt: A0A0A8R8E6
Pockets: 2 · best druggability 0.43

Structure

x-ray diffraction · 1 distinct chain · 8% helix, 46% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative heme binding protein	protein	192	8% helix, 46% strand	A0A0A8R8E6

Ligands and binding sites

MLI · Malonate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	146	0.43	0.75	13	empty
2	61	0.40	0.80	11	empty

Compared structures

6EU8 · Crystal structure of Tannerella forsythia Apo HmuY analog (TFO) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0A8R8E6
Elsewhere: RCSB PDB 6EU8 · PDBe 6EU8 · UniProt A0A0A8R8E6

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