MolNFT v1 · #147997 · protein

Cold-adapted beta-D-galactosidase from arthrobacter sp. 32CB

6ETZ · Beta-galactosidase: “Cold-adapted beta-D-galactosidase from arthrobacter sp. 32CB”. X-ray diffraction, 1 ligand (NA), 15 pockets (best druggability 0.62). MolNFT v1 #147997 on GenesisL1: 3D structure, binding sites and pockets in…

PDB: 6ETZ
Type: protein
Length: 989 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Beta-galactosidase
EC: 3.2.1.23
UniProt: A0A023UGN9
Ligands: NA
Pockets: 15 · best druggability 0.62

Structure

x-ray diffraction · 1 distinct chain · 16% helix, 38% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Beta-galactosidase (EC 3.2.1.23)	protein	989	16% helix, 38% strand	A0A023UGN9

Ligands and binding sites

NA · Sodium ion · metal · chains A
ACT · Acetate ion · additive · 4 copies · chains A
MLI · Malonate ion · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

15 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	180	0.62	0.84	28	empty
2	199	0.55	0.79	32	empty
3	109	0.54	0.83	23	empty
4	249	0.52	0.75	39	empty
5	65	0.51	0.86	19	empty

Compared structures

6ETZ · Cold-adapted beta-D-galactosidase from Arthrobacter sp. 32cB · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A023UGN9
Elsewhere: RCSB PDB 6ETZ · PDBe 6ETZ · UniProt A0A023UGN9

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