MolNFT v1 · #147916 · protein

Self-complemented fima subunit from salmonella enterica

6ERJ · Type-1 fimbrial protein, a chain: “Self-complemented fima subunit from salmonella enterica”. X-ray diffraction, 2 pockets (best druggability 0.55). MolNFT v1 #147916 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6ERJ
Type: protein
Length: 321 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Type-1 fimbrial protein, a chain
UniProt: A0A0H2WR29
Pockets: 2 · best druggability 0.55

Structure

x-ray diffraction · 2 distinct chains · 3% helix, 53% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B	Type-1 fimbrial protein, a chain	protein	160	2% helix, 54% strand	A0A0H2WR29
A	Type-1 fimbrial protein, a chain	protein	161	4% helix, 52% strand	A0A0H2WR29

Ligands and binding sites

ACY · Acetic acid · additive · 3 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	133	0.55	0.82	21	empty
2	156	0.47	0.77	29	empty

Interfaces

1 interface between chains.

B–A · 297 Å² buried · 6 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 disulfide (disulfide).

Compared structures

6ERJ · Self-complemented FimA subunit from Salmonella enterica · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0H2WR29
Elsewhere: RCSB PDB 6ERJ · PDBe 6ERJ · UniProt A0A0H2WR29

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