MolNFT v1 · #147724 · protein

Recombinantly expressed C-terminal domain of MDPPO1 (csole-domain)

6ELV · Polyphenol oxidase, chloroplastic: “Recombinantly expressed C-terminal domain of MDPPO1 (csole-domain)”. X-ray diffraction, 2 ligands (CA, CL), 1 pocket (best druggability 0.38). MolNFT v1 #147724 on GenesisL1: 3D structure, binding…

PDB: 6ELV
Type: protein
Length: 134 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Polyphenol oxidase, chloroplastic
Ligands: CA, CL
Pockets: 1 · best druggability 0.38

Structure

x-ray diffraction · 1 distinct chain · 10% helix, 47% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Polyphenol oxidase, chloroplastic	protein	134	10% helix, 47% strand	—

Ligands and binding sites

CA · Calcium ion · metal · chains A
CL · Chloride ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	96	0.38	0.76	22	empty

Compared structures

6ELV · Recombinantly expressed C-terminal domain of MdPPO1 (Csole-domain) · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Elsewhere: RCSB PDB 6ELV · PDBe 6ELV

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