MolNFT v1 · #147405 · protein
Crystal structure of the class ie ribonucleotide reductase beta subunit from aerococcus urinae in activated form with thiocyanate bound
6EBZ: “Crystal structure of the class ie ribonucleotide reductase beta subunit from aerococcus urinae in activated…”. X-ray diffraction, 2 ligands (CA, SCN). MolNFT v1 #147405 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6EBZ
- Type
- protein
- Length
- 1,230 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- F2I8X9
- Ligands
- CA, SCN
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 312 | — | F2I8X9 |
| B | — | protein | 302 | — | F2I8X9 |
| C | — | protein | 303 | — | F2I8X9 |
| D | — | protein | 313 | — | F2I8X9 |
Ligands and binding sites
- CA · Calcium ion · metal · 6 copies · chains A, B, C, D
- SCN · Thiocyanate ion · ion · 5 copies · chains B, A, C, D
- GOL · Glycerol · additive · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EBZ · Crystal Structure of the Class Ie Ribonucleotide Reductase Beta Subunit from Aerococcus… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt F2I8X9
- Elsewhere: RCSB PDB 6EBZ · PDBe 6EBZ · UniProt F2I8X9
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