MolNFT v1 · #147345 · protein
ERAP2 bound to aryl sulfonamide uncompetitive inhibitor
6EA4: “ERAP2 bound to aryl sulfonamide uncompetitive inhibitor”. X-ray diffraction, 5 ligands (J2G, NAG, MAN). MolNFT v1 #147345 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6EA4
- Type
- protein
- Length
- 1,756 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q6P179
- Ligands
- J2G, NAG, MAN, BMA, ZN
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 885 | — | Q6P179 |
| B | — | protein | 871 | — | Q6P179 |
Ligands and binding sites
- J2G · 4-methoxy-3-{[2-(piperidin-1-yl)-4-(trifluoromethyl) phenyl]sulfamoyl}benzoic acid · ligand · 2 copies · chains A, B
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 21 copies · chains A, B
- MAN · alpha-D-mannopyranose · sugar · 6 copies · chains B, A
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains B, A
- ZN · Zinc ion · metal · 2 copies · chains A, B
- MES · 2-(N-morpholino)-ethanesulfonic acid · additive · 2 copies · chains A, B
- IMD · Imidazole · additive · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · 2 copies · chains A, B
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6EA4 · ERAP2 bound to Aryl Sulfonamide Uncompetitive Inhibitor · the same entry in another collection · chain A against A, TM-score 1.00
- Q6P179 · AlphaFold monomer V2.0 prediction for endoplasmic reticulum aminopeptidase 2 (Q6P179) · a predicted model of the same protein · chain B against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6P179
- Elsewhere: RCSB PDB 6EA4 · PDBe 6EA4 · UniProt Q6P179
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