MolNFT v1 · #147111 · protein
Mddef in complex with mvapp, ADPBEF3 and magnesium
6E2V: “Mddef in complex with mvapp, ADPBEF3 and magnesium”. X-ray diffraction, 4 ligands (DP6, BEF, ADP). MolNFT v1 #147111 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E2V
- Type
- protein
- Length
- 327 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q9FD68
- Ligands
- DP6, BEF, ADP, MG
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 327 | — | Q9FD68 |
Ligands and binding sites
- DP6 · (3R)-3-hydroxy-5-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}-3-methylpentanoic acid · ligand · chains A
- BEF · Beryllium trifluoride ion · ligand · chains A
- ADP · Adenosine-5'-diphosphate · ligand · chains A
- MG · Magnesium ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E2V · MDDEF in complex with MVAPP, ADPBeF3 and magnesium · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9FD68
- Elsewhere: RCSB PDB 6E2V · PDBe 6E2V · UniProt Q9FD68
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