Ligand · DP6
DP6 · (3R)-3-hydroxy-5-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}-3-methylpentanoic acid
DP6, (3R)-3-hydroxy-5-{[(R)-hydroxy(phosphonooxy)phosphoryl]oxy}-3-methylpentanoic acid (C6 H14 O10 P2, 308.1 g/mol), in the MolNFT structures on GenesisL1: bound in 13 records (10 PDB entries). Every binding site with its residues within…
- Component
- DP6
- Formula
- C6 H14 O10 P2
- Class
- ligand
- Structures
- 13
- PDB entries
- 10
Binding sites
DP6 in 13 structures; the first of them:
- 5GMD · Crystal structure of Sulfolobus solfataricus diphosphomevalonate decarboxylase in complex… · DP6 A1001 · binds ALA14, LYS17, TYR18, TRP19, LYS21, ASN28, SER139, GLY140 and 7 more
- 5GME · Crystal structure of Sulfolobus solfataricus Diphosphomevalonate decarboxylase in complex… · DP6 A1001 · binds ALA14, LYS17, TYR18, TRP19, LYS21, ASN28, TYR72, SER139 and 9 more
- 6E2T · MDDEF in complex with MVAPP · DP6 A401 · binds ALA13, LYS16, TYR17, TRP18, LYS20, ILE26, LYS71, SER106 and 11 more
- 6E2U · MDDEF in complex with MVAPP, AMPPCP and Magnesium · DP6 A401 · binds ALA13, LYS16, TYR17, TRP18, LYS20, ILE26, LYS71, SER106 and 11 more
- 6E2Y · MDDEF in complex with MVAPP, ADP, sulfate and cobalt. Anomalous data · DP6 A403 · binds ALA13, LYS16, TYR17, TRP18, LYS20, ILE26, SER106, GLY137 and 10 more
- 6E2T · Mddef in complex with mvapp · DP6 A401 · binds ALA13, LYS16, TYR17, TRP18, LYS20, ILE26, LYS71, SER138 and 8 more
- 6E2U · Mddef in complex with mvapp, amppcp and magnesium · DP6 A401 · binds ALA13, LYS16, TYR17, LYS20, ILE26, LYS71, SER106, SER138 and 8 more
- 6E2V · Mddef in complex with mvapp, ADPBEF3 and magnesium · DP6 A403 · binds ALA13, LYS16, TYR17, LYS20, ILE26, SER106, SER138, GLY139 and 8 more
- 6E2W · Mddef in complex with mvapp, ADP, sulfate and cobalt · DP6 A403 · binds ALA13, TYR17, TRP18, LYS20, ILE26, SER106, SER138, GLY139 and 8 more
- 6E2Y · Mddef in complex with mvapp, ADP, sulfate and cobalt. anomalous data · DP6 A403 · binds ALA13, TYR17, TRP18, LYS20, ILE26, SER106, SER138, GLY139 and 8 more
- 6N0Y · Crystal structure of anaerolinea thermophila mevalonate 5-phosphate decarboxylase… · DP6 A401 · binds ALA13, LYS16, TYR17, TRP18, ARG71, ALA104, SER106, SER138 and 8 more
- 6N0Z · Crystal structure of anaerolinea thermophila mevalonate 5-phosphate decarboxylase N20K… · DP6 A401 · binds ALA13, LYS16, TYR17, TRP18, LYS20, ARG26, ARG71, SER106 and 9 more
- 6N10 · Crystal structure of arabidopsis thaliana mevalonate 5-diphosphate decarboxylase 1… · DP6 A501 · binds ALA19, LYS22, TYR23, TRP24, LYS26, ILE32, ARG78, SER161 and 8 more
Residues it binds most
SER 23, ARG 23, ALA 23, LYS 23, MET 22, GLY 23, TYR 23, ASP 23, TRP 16, ILE 9 (residue and the binding sites it lines).
Found with
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