MolNFT v1 · #147090 · protein
Displacement of WDR5 from chromatin by a pharmacological win site inhibitor with picomolar affinity
6E23: “Displacement of WDR5 from chromatin by a pharmacological win site inhibitor with picomolar affinity”. X-ray diffraction, 1 ligand (HLJ). MolNFT v1 #147090 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E23
- Type
- protein
- Length
- 602 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P61964
- Ligands
- HLJ
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 299 | — | P61964 |
| B | — | protein | 303 | — | P61964 |
Ligands and binding sites
- HLJ · N-[(3,4-dichlorophenyl)methyl]-3-(6-fluoro-2-methylpyridin-3-yl)-5-{[(2E)-2-imino-3-methyl-2,3-dihydro-1H-imidazol-1-yl]methyl}benzamide · ligand · 2 copies · chains A, B
- EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E23 · Displacement of WDR5 from chromatin by a pharmacological WIN site inhibitor with… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P61964
- Elsewhere: RCSB PDB 6E23 · PDBe 6E23 · UniProt P61964
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