MolNFT v1 · #147075 · protein
AFTMEM16 reconstituted in nanodiscs in the presence of CA2+ and ceramide 24:0
6E1O: “AFTMEM16 reconstituted in nanodiscs in the presence of CA2+ and ceramide 24:0”. Electron microscopy, 4 ligands (D12, D10, 8K6). MolNFT v1 #147075 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6E1O
- Type
- protein
- Length
- 1,182 residues
- Chains
- 2
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q4WA18
- Ligands
- D12, D10, 8K6, CA
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 591 | — | Q4WA18 |
Ligands and binding sites
- D12 · Dodecane · ligand · 8 copies · chains B, A
- D10 · Decane · ligand · 2 copies · chains B, A
- 8K6 · Octadecane · ligand · 2 copies · chains B, A
- CA · Calcium ion · metal · 4 copies · chains B, A
- HEX · Hexane · additive · 2 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6E1O · afTMEM16 reconstituted in nanodiscs in the presence of Ca2+ and ceramide 24:0 · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q4WA18
- Elsewhere: RCSB PDB 6E1O · PDBe 6E1O · UniProt Q4WA18
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