MolNFT v1 · #146975 · protein
Iron- and nitric oxide-bound structure of the engineered cyt B562 variant, CH3Y*
6DYK: “Iron- and nitric oxide-bound structure of the engineered cyt B562 variant, CH3Y*”. X-ray diffraction, 2 ligands (FE, NO). MolNFT v1 #146975 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DYK
- Type
- protein
- Length
- 424 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P0ABE7
- Ligands
- FE, NO
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C, E, G | — | protein | 106 | — | P0ABE7 |
Ligands and binding sites
- FE · Fe (III) ion · metal · 2 copies · chains A, E, C, G
- NO · Nitric oxide · ion · 2 copies · chains A, E, C, G
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DYK · Iron- and Nitric Oxide-bound structure of the engineered cyt b562 variant, CH3Y* · the same entry in another collection · chain G against G, TM-score 1.00
- P0ABE7 · AlphaFold monomer V2.0 prediction for soluble cytochrome B562 (P0ABE7) · a predicted model of the same protein · chain G against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0ABE7
- Elsewhere: RCSB PDB 6DYK · PDBe 6DYK · UniProt P0ABE7
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