MolNFT v1 · #146940 · protein
Linked amidobenzimidazole sting agonist
6DXL: “Linked amidobenzimidazole sting agonist”. X-ray diffraction, 2 ligands (HG4, CA). MolNFT v1 #146940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DXL
- Type
- protein
- Length
- 356 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A2R3XZB7
- Ligands
- HG4, CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 177 | — | A0A2R3XZB7 |
| B | — | protein | 179 | — | A0A2R3XZB7 |
Ligands and binding sites
- HG4 · 1,1'-(butane-1,4-diyl)bis{2-[(1-ethyl-3-methyl-1H-pyrazole-5-carbonyl)amino]-1H-benzimidazole-5-carboxamide} · ligand · chains A, B
- CA · Calcium ion · metal · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DXL · Linked amidobenzimidazole STING agonist · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A2R3XZB7
- Elsewhere: RCSB PDB 6DXL · PDBe 6DXL · UniProt A0A2R3XZB7
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