MolNFT v1 · #146833 · protein

Structure of SCP1 D96N bound to rest-PS861/4 peptide

6DU3: “Structure of SCP1 D96N bound to rest-PS861/4 peptide”. X-ray diffraction, 1 ligand (MG). MolNFT v1 #146833 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 6DU3
Type: protein
Length: 372 residues
Chains: 4
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9GZU7
Ligands: MG

Structure

x-ray diffraction · 3 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	—	protein	180	—	Q9GZU7
C	—	protein	7	—	—
D	—	protein	5	—	—

Ligands and binding sites

MG · Magnesium ion · metal · 2 copies · chains A, C, B, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6DU3 · Structure of Scp1 D96N bound to REST-pS861/4 peptide · the same entry in another collection · chain A against A, TM-score 1.00
Q9GZU7 · AlphaFold monomer V2.0 prediction for carboxy-terminal domain RNA polymerase II… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9GZU7
Elsewhere: RCSB PDB 6DU3 · PDBe 6DU3 · UniProt Q9GZU7

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