MolNFT v1 · #146548 · protein + DNA
Structure of the rbpj-sharp-DNA repressor complex
6DKS: “Structure of the rbpj-sharp-DNA repressor complex”. X-ray diffraction, 1 ligand (GLC). MolNFT v1 #146548 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DKS
- Type
- protein + DNA
- Length
- 1,711 residues
- Chains
- 8
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P31266, P0AEY0
- Ligands
- GLC
Structure
x-ray diffraction · 6 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, E | — | dna | 15 | — | — |
| B, F | — | dna | 15 | — | — |
| C | — | protein | 417 | — | P31266 |
| D | — | protein | 407 | — | P0AEY0 |
| G | — | protein | 422 | — | P31266 |
| H | — | protein | 405 | — | P0AEY0 |
Ligands and binding sites
- GLC · alpha-D-glucopyranose · sugar · 4 copies · chains D, H
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DKS · Structure of the Rbpj-SHARP-DNA Repressor Complex · the same entry in another collection · chain H against H, TM-score 1.00
- P31266 · AlphaFold monomer V2.0 prediction for recombining binding protein suppressor of hairless… · a predicted model of the same protein · chain C against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P31266
- Every structure of UniProt P0AEY0
- Elsewhere: RCSB PDB 6DKS · PDBe 6DKS · UniProt P31266 · UniProt P0AEY0
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