MolNFT v1 · #146472 · protein
HIV-1 protease with single mutation L76V in complex with tipranavir
6DIL: “HIV-1 protease with single mutation L76V in complex with tipranavir”. X-ray diffraction, 3 ligands (TPV, NA, CL). MolNFT v1 #146472 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6DIL
- Type
- protein
- Length
- 198 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q5RZ08
- Ligands
- TPV, NA, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | — | protein | 99 | — | Q5RZ08 |
Ligands and binding sites
- TPV · N-(3-{(1R)-1-[(6R)-4-hydroxy-2-oxo-6-phenethyl-6-propyl-5,6-dihydro-2H-pyran-3-yl]propyl}phenyl)-5-(trifluoromethyl)-2-pyridinesulfonamide · ligand · chains A, B
- NA · Sodium ion · metal · chains A
- CL · Chloride ion · ion · 2 copies · chains A, B
- GOL · Glycerol · additive · 3 copies · chains A, B
- ACT · Acetate ion · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6DIL · HIV-1 protease with single mutation L76V in complex with tipranavir · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5RZ08
- Elsewhere: RCSB PDB 6DIL · PDBe 6DIL · UniProt Q5RZ08
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