MolNFT v1 · #146333 · protein
Crystal structure of the C-terminus of homo sapiens SPIN90 (SH3- protein interacting with nck), residues 306-722
6DEE · Nck-interacting protein with SH3 domain: “Crystal structure of the C-terminus of homo sapiens SPIN90 (SH3- protein interacting with nck), residues…”. X-ray diffraction, 3 pockets (best druggability 0.67). MolNFT v1 #146333 on…
- PDB
- 6DEE
- Type
- protein
- Length
- 382 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Nck-interacting protein with SH3 domain
- UniProt
- Q9NZQ3
- Pockets
- 3 · best druggability 0.67
Structure
x-ray diffraction · 1 distinct chain · 69% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Nck-interacting protein with SH3 domain | protein | 382 | 69% helix, 0% strand | Q9NZQ3 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 307 | 0.67 | 0.82 | 47 | empty |
| 2 | 85 | 0.60 | 0.88 | 21 | empty |
| 3 | 138 | 0.49 | 0.79 | 32 | empty |
Compared structures
- 6DEE · Crystal structure of the C-terminus of Homo sapiens SPIN90 (SH3-protein interacting with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q9NZQ3 · AlphaFold monomer V2.0 prediction for nck-interacting protein with SH3 domain (Q9NZQ3) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NZQ3
- Elsewhere: RCSB PDB 6DEE · PDBe 6DEE · UniProt Q9NZQ3
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