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MolNFT v1 · #146322 · protein

Crystal structure of the double mutant (D52N/L375F) of the full-length NT5C2 in the active state

6DE2: “Crystal structure of the double mutant (D52N/L375F) of the full-length NT5C2 in the active state”. X-ray diffraction, 3 ligands (ATP, MG, PO4). MolNFT v1 #146322 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6DE2
Type
protein
Length
472 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P49902
Ligands
ATP, MG, PO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein472—P49902

Ligands and binding sites

  • ATP · Adenosine-5'-triphosphate · ligand · chains A
  • MG · Magnesium ion · metal
  • PO4 · Phosphate ion · ion · chains A
  • EDO · 1,2-ethanediol · additive · 3 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6DE2 · Crystal structure of the double mutant (D52N/L375F) of the full-length NT5C2 in the… · the same entry in another collection · chain A against A, TM-score 1.00
  • P49902 · AlphaFold monomer V2.0 prediction for cytosolic purine 5'-nucleotidase (P49902) · a predicted model of the same protein · chain A against A, TM-score 0.92

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