MolNFT v1 · #146159 · protein
Crystal structure of corynebacterium diphtheriae udp-galactopyranose mutase in complex with udp-glucose (open, oxidized)
6D9B: “Crystal structure of corynebacterium diphtheriae udp-galactopyranose mutase in complex with udp-glucose…”. X-ray diffraction, 3 ligands (FAD, UPG, NA). MolNFT v1 #146159 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D9B
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A246CDW5
- Ligands
- FAD, UPG, NA
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 386 | — | A0A246CDW5 |
Ligands and binding sites
- FAD · Flavin-adenine dinucleotide · ligand · chains A
- UPG · Uridine-5'-diphosphate-glucose · ligand · chains A
- NA · Sodium ion · metal · chains A
- IPA · Isopropyl alcohol · additive · 4 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D9B · Crystal structure of Corynebacterium diphtheriae UDP-galactopyranose mutase in complex… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A246CDW5
- Elsewhere: RCSB PDB 6D9B · PDBe 6D9B · UniProt A0A246CDW5
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