MolNFT v1 · #145986 · protein
Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5- lactone
6D41: “Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5- lactone”. X-ray diffraction, 2 ligands (GCB, CL). MolNFT v1 #145986 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6D41
- Type
- protein
- Length
- 1,158 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A174CQK8
- Ligands
- GCB, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | — | protein | 579 | — | A0A174CQK8 |
Ligands and binding sites
- GCB · (2S,3S,4S,5R)-3,4,5-trihydroxy-6-oxo-oxane-2-carboxylic acid · ligand · 2 copies · chains B, A
- CL · Chloride ion · ion · 2 copies · chains B, A
- GOL · Glycerol · additive · 8 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6D41 · Bacteriodes uniformis beta-glucuronidase 1 bound to D-glucaro-1,5-lactone · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A174CQK8
- Elsewhere: RCSB PDB 6D41 · PDBe 6D41 · UniProt A0A174CQK8
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