MolNFT v1 · #145682 · protein
Cryoem structure of human enterovirus D68 in complex with 6'-sialyl-N- acetyllactosamine
6CVB: “Cryoem structure of human enterovirus D68 in complex with 6'-sialyl-N- acetyllactosamine”. Electron microscopy, 3 ligands (NAG, GAL, SIA). MolNFT v1 #145682 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6CVB
- Type
- protein
- Length
- 804 residues
- Chains
- 4
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A0X7Z9B1, E9RIT6, A0A097ZN88, A0A0P0DH17
- Ligands
- NAG, GAL, SIA
Structure
electron microscopy · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 290 | — | A0A0X7Z9B1 |
| B | — | protein | 247 | — | E9RIT6 |
| C | — | protein | 237 | — | A0A097ZN88 |
| D | — | protein | 30 | — | A0A0P0DH17 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · chains B
- GAL · beta-D-galactopyranose · sugar · chains A, B
- SIA · N-acetyl-alpha-neuraminic acid · sugar · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6CVB · CryoEM structure of human enterovirus D68 in complex with 6'-sialyl-N-acetyllactosamine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0X7Z9B1
- Every structure of UniProt E9RIT6
- Every structure of UniProt A0A097ZN88
- Every structure of UniProt A0A0P0DH17
- Elsewhere: RCSB PDB 6CVB · PDBe 6CVB · UniProt A0A0X7Z9B1 · UniProt E9RIT6 · UniProt A0A097ZN88 · UniProt A0A0P0DH17
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.