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MolNFT v1 · #145567 · protein

SARS spike glycoprotein, stabilized variant, C3 symmetry

6CRV: “SARS spike glycoprotein, stabilized variant, C3 symmetry”. Electron microscopy, 2 ligands (NAG, BMA). MolNFT v1 #145567 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6CRV
Type
protein
Length
2,643 residues
Chains
3
Method
electron microscopy
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P59594, D9IEJ2
Ligands
NAG, BMA

Structure

electron microscopy · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B, C—protein881—P59594, D9IEJ2

Ligands and binding sites

  • NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 36 copies · chains A, C, B
  • BMA · beta-D-mannopyranose · sugar · 3 copies

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6CRV · SARS Spike Glycoprotein, Stabilized variant, C3 symmetry · the same entry in another collection · chain C against C, TM-score 1.00
  • 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.11
  • 3SCK · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain A against E, TM-score 0.11
  • 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain B against E, TM-score 0.11
  • 3SCJ · Crystal structure of spike protein receptor-binding domain from a predicted SARS… · a predicted model of the same protein · chain B against E, TM-score 0.11

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