MolNFT v1 · #144940 · protein
Crystal structure of fcrn bound to ucb-84
6C98: “Crystal structure of fcrn bound to ucb-84”. X-ray diffraction, 1 ligand (ER7). MolNFT v1 #144940 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6C98
- Type
- protein
- Length
- 724 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P55899, P61769
- Ligands
- ER7
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, C | — | protein | 263 | — | P55899 |
| B, D | — | protein | 99 | — | P61769 |
Ligands and binding sites
- ER7 · 1-[7-(3-fluorophenyl)-5-methyl[1,2,4]triazolo[1,5-a]pyrimidin-6-yl]ethan-1-one · ligand · 2 copies · chains A, B, C, D
- GOL · Glycerol · additive · 2 copies · chains B, D
- PEG · Di(hydroxyethyl)ether · additive · chains B, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6C98 · Crystal structure of FcRn bound to UCB-84 · the same entry in another collection · chain D against D, TM-score 1.00
- P55899 · AlphaFold monomer V2.0 prediction for IgG receptor fcrn large subunit P51 (P55899) · a predicted model of the same protein · chain C against A, TM-score 0.99
- P61769 · AlphaFold monomer V2.0 prediction for beta-2-microglobulin (P61769) · a predicted model of the same protein · chain D against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P55899
- Every structure of UniProt P61769
- Elsewhere: RCSB PDB 6C98 · PDBe 6C98 · UniProt P55899 · UniProt P61769
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