MolNFT v1 · #144673 · protein
Crystal structure of cgmp-dependent protein kinase ialpha (pkg ialpha) catalytic domain bound with N46
6C0T: “Crystal structure of cgmp-dependent protein kinase ialpha (pkg ialpha) catalytic domain bound with N46”. X-ray diffraction, 1 ligand (EE4). MolNFT v1 #144673 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6C0T
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q13976
- Ligands
- EE4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 335 | — | Q13976 |
Ligands and binding sites
- EE4 · N-[(3R,4R)-4-{[4-(2-fluoro-3-methoxy-6-propoxybenzene-1-carbonyl)benzene-1-carbonyl]amino}pyrrolidin-3-yl]-1H-indazole-5-carboxamide · ligand · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
- PGE · Triethylene glycol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6C0T · Crystal structure of cGMP-dependent protein kinase Ialpha (PKG Ialpha) catalytic domain… · the same entry in another collection · chain A against A, TM-score 1.00
- Q13976 · AlphaFold monomer V2.0 prediction for cgmp-dependent protein kinase 1 (Q13976) · a predicted model of the same protein · chain A against A, TM-score 0.98
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q13976
- Elsewhere: RCSB PDB 6C0T · PDBe 6C0T · UniProt Q13976
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