E. COLI msba in complex with lps and inhibitor G092

Structure

x-ray diffraction · 2 distinct chains.

Ligands and binding sites

• 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine · ligand · 7 copies · chains A, B
• FTT · 3-hydroxy-tetradecanoic acid · ligand · 4 copies · chains A, B
• E1M · (2E)-3-{6-[(1S)-1-(3-amino-2,6-dichlorophenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid · ligand · 2 copies · chains A, B
• PA1 · 2-amino-2-deoxy-alpha-D-glucopyranose · ligand · chains B
• DAO · Lauric acid · ligand · chains A, B
• MYR · Myristic acid · ligand · chains A, B
• GMH · L-glycero-alpha-D-manno-heptopyranose · sugar · 3 copies
• GLC · alpha-D-glucopyranose · sugar · 3 copies
• KDO · 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid · sugar · 2 copies · chains B
• GCS · 2-amino-2-deoxy-beta-D-glucopyranose · sugar · chains B
• PO4 · Phosphate ion · ion · 2 copies · chains B, A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

• 6BPP · E. coli MsbA in complex with LPS and inhibitor G092 · the same entry in another collection · chain A against A, TM-score 1.00
• Q8FJB1 · AlphaFold monomer V2.0 prediction for ATP-dependent lipid a-core flippase (Q8FJB1) · a predicted model of the same protein · chain B against A, TM-score 0.94

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt Q8FJB1
• Elsewhere: RCSB PDB 6BPP · PDBe 6BPP · UniProt Q8FJB1