UniProt Q8FJB1
Lipid A export ATP-binding/permease protein MsbA (Q8FJB1)
Lipid A export ATP-binding/permease protein MsbA (UniProt Q8FJB1), EC 3.6.3.-: 4 experimental structures and 1 predicted model on GenesisL1, 12 ligands bound, 37 pockets. Binding sites, druggability and experiment against…
- UniProt
- Q8FJB1
- Protein
- Lipid A export ATP-binding/permease protein MsbA
- EC
- 3.6.3.-
- Experimental structures
- 4
- Predicted models
- 1
- Ligands
- 12
- Pockets
- 37 · 3 records with a druggable one
Structures
5 records of Q8FJB1 in the MolNFT archive: 4 experimental, 1 predicted.
| Entry | Title | Method | Chains | Ligands | Pockets |
|---|---|---|---|---|---|
| 6BPL | E. coli MsbA in complex with LPS and inhibitor G907 | x-ray diffraction | A, B | GMH, GLC, GCS, KDO, 3PE, AU7 | 18 (best 0.83) |
| 6BPL | E. COLI msba in complex with lps and inhibitor G907 | x-ray diffraction | A, B | GLC, GMH, GCS, KDO, 3PE, AU7 | — |
| 6BPP | E. coli MsbA in complex with LPS and inhibitor G092 | x-ray diffraction | A, B | PA1, GCS, KDO, GLC, GMH, E1M | 13 (best 0.83) |
| 6BPP | E. COLI msba in complex with lps and inhibitor G092 | x-ray diffraction | A, B | PA1, GCS, KDO, E1M, FTT, DAO | — |
| Q8FJB1 | AlphaFold monomer V2.0 prediction for ATP-dependent lipid a-core flippase (Q8FJB1) | predicted | A | — | 6 (best 0.61) |
Ligands
- 3PE · 1,2-diacyl-sn-glycero-3-phosphoethanolamine · in 4 records
- DAO · Lauric acid · in 4 records
- FTT · 3-hydroxy-tetradecanoic acid · in 4 records
- GCS · 2-amino-2-deoxy-beta-D-glucopyranose · in 4 records
- KDO · 3-deoxy-alpha-D-manno-oct-2-ulopyranosonic acid · in 4 records
- MYR · Myristic acid · in 4 records
- PA1 · 2-amino-2-deoxy-alpha-D-glucopyranose · in 4 records
- PO4 · Phosphate ion · in 4 records
- GLC · alpha-D-glucopyranose · in 3 records
- GMH · L-glycero-alpha-D-manno-heptopyranose · in 3 records
- AU7 · (2E)-3-{6-[(1S)-1-(2-chloro-6-cyclopropylphenyl) ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid · in 2 records
- E1M · (2E)-3-{6-[(1S)-1-(3-amino-2,6-dichlorophenyl)ethoxy]-4-cyclopropylquinolin-3-yl}prop-2-enoic acid · in 2 records
Experiment against prediction
- 6BPL chain B against the predicted model Q8FJB1: TM-score 0.94, RMSD 1.80 Å
- 6BPL chain B against the predicted model Q8FJB1: TM-score 0.94, RMSD 1.80 Å
- 6BPP chain B against the predicted model Q8FJB1: TM-score 0.94, RMSD 1.98 Å
- 6BPP chain B against the predicted model Q8FJB1: TM-score 0.94, RMSD 1.98 Å
- 6BPL chain A against the predicted model Q8FJB1: TM-score 0.93, RMSD 2.53 Å
- 6BPL chain A against the predicted model Q8FJB1: TM-score 0.93, RMSD 2.53 Å
- 6BPP chain A against the predicted model Q8FJB1: TM-score 0.92, RMSD 2.55 Å
- 6BPP chain A against the predicted model Q8FJB1: TM-score 0.92, RMSD 2.55 Å
Elsewhere
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