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MolNFT v1 · #144283 · protein + DNA

Human APE1 substrate complex with an A/G mismatch adjacent the thf

6BOV: “Human APE1 substrate complex with an A/G mismatch adjacent the thf”. X-ray diffraction. MolNFT v1 #144283 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6BOV
Type
protein + DNA
Length
581 residues
Chains
4
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P27695

Structure

x-ray diffraction · 4 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein270—P27695
B—protein269—P27695
P—dna21——
V—dna21——

Ligands and binding sites

  • PEG · Di(hydroxyethyl)ether · additive · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6BOV · Human APE1 substrate complex with an A/G mismatch adjacent the THF · the same entry in another collection · chain A against A, TM-score 1.00
  • P27695 · AlphaFold monomer V2.0 prediction for DNA-(apurinic or apyrimidinic site) endonuclease… · a predicted model of the same protein · chain A against A, TM-score 1.00

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