MolNFT v1 · #144281 · protein + DNA
Human APE1 substrate complex with an C/C mismatch adjacent the thf
6BOT: “Human APE1 substrate complex with an C/C mismatch adjacent the thf”. X-ray diffraction. MolNFT v1 #144281 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6BOT
- Type
- protein + DNA
- Length
- 578 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P27695
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 267 | — | P27695 |
| B | — | protein | 269 | — | P27695 |
| P | — | dna | 21 | — | — |
| V | — | dna | 21 | — | — |
Ligands and binding sites
- EDO · 1,2-ethanediol · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6BOT · Human APE1 substrate complex with an C/C mismatch adjacent the THF · the same entry in another collection · chain A against A, TM-score 1.00
- P27695 · AlphaFold monomer V2.0 prediction for DNA-(apurinic or apyrimidinic site) endonuclease… · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P27695
- Elsewhere: RCSB PDB 6BOT · PDBe 6BOT · UniProt P27695
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