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MolNFT v1 · #144220 · protein

Salvador hippo sarah domain complex

6BN1 · SERINE/THREONINE-protein kinase hippo: “Salvador hippo sarah domain complex”. X-ray diffraction, 1 ligand (NI). MolNFT v1 #144220 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6BN1
Type
protein
Length
124 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
SERINE/THREONINE-protein kinase hippo; Scaffold protein salvador
EC
2.7.11.1
UniProt
Q8T0S6, Q9VCR6
Ligands
NI

Structure

x-ray diffraction · 2 distinct chains · 80% helix, 0% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
ASERINE/THREONINE-protein kinase hippo (EC 2.7.11.1)protein5489% helix, 0% strandQ8T0S6
BScaffold protein salvadorprotein7073% helix, 0% strandQ9VCR6

Ligands and binding sites

  • NI · Nickel (II) ion · metal · chains B
  • MPD · (4S)-2-methyl-2,4-pentanediol · additive · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Interfaces

1 interface between chains.

  • A–B · 1744 Ų buried · 22 hydrogen bonds · protein-protein

Compared structures

  • 6BN1 · Salvador Hippo SARAH domain complex · the same entry in another collection · chain A against A, TM-score 1.00
  • Q9VCR6 · AlphaFold monomer V2.0 prediction for scaffold protein salvador (Q9VCR6) · a predicted model of the same protein · chain B against A, TM-score 0.93
  • Q8T0S6 · AlphaFold monomer V2.0 prediction for SERINE/THREONINE-protein kinase hippo (Q8T0S6) · a predicted model of the same protein · chain A against A, TM-score 0.79

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