MolNFT v1 · #144191 · protein
Crystal structure of the meth reactivation domain bound to adomet
6BM5 · Methionine synthase: “Crystal structure of the meth reactivation domain bound to adomet”. X-ray diffraction, 1 ligand (SAM), 1 pocket (best druggability 0.51). MolNFT v1 #144191 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6BM5
- Type
- protein
- Length
- 325 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Methionine synthase
- EC
- 2.1.1.13
- UniProt
- P13009
- Ligands
- SAM
- Pockets
- 1 · best druggability 0.51
Structure
x-ray diffraction · 1 distinct chain · 41% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Methionine synthase (EC 2.1.1.13) | protein | 325 | 41% helix, 18% strand | P13009 |
Ligands and binding sites
- SAM · S-adenosylmethionine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 180 | 0.51 | 0.78 | 32 | SAM |
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P13009
- Elsewhere: RCSB PDB 6BM5 · PDBe 6BM5 · UniProt P13009
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.