MolNFT v1 · #144149 · protein
Crystal structure of the A/HONG KONG/1/1968 (H3N2) influenza virus hemagglutinin E190D mutant in complex with 6'-sln
6BKQ: “Crystal structure of the A/HONG KONG/1/1968 (H3N2) influenza virus hemagglutinin E190D mutant in complex with…”. X-ray diffraction, 6 ligands (TAM, NAG, BMA). MolNFT v1 #144149 on GenesisL1: 3D structure, binding sites and pockets…
- PDB
- 6BKQ
- Type
- protein
- Length
- 1,469 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q91MA7
- Ligands
- TAM, NAG, BMA, MAN, GAL, SIA
Structure
x-ray diffraction · 4 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 321 | — | Q91MA7 |
| B | — | protein | 172 | — | Q91MA7 |
| C, E | — | protein | 317 | — | Q91MA7 |
| D, F | — | protein | 171 | — | Q91MA7 |
Ligands and binding sites
- TAM · Tris(hydroxyethyl)aminomethane · ligand · 2 copies · chains C, E
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 20 copies · chains A, C, B, E, D, F
- BMA · beta-D-mannopyranose · sugar · 4 copies · chains C, E, A
- MAN · alpha-D-mannopyranose · sugar · 4 copies · chains A, E
- GAL · beta-D-galactopyranose · sugar · 3 copies · chains A, C, E
- SIA · N-acetyl-alpha-neuraminic acid · sugar · 3 copies · chains A, C, E
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6BKQ · Crystal structure of the A/Hong Kong/1/1968 (H3N2) influenza virus hemagglutinin E190D… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q91MA7
- Elsewhere: RCSB PDB 6BKQ · PDBe 6BKQ · UniProt Q91MA7
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