MolNFT v1 · #144110 · protein
PICK1 PDZ domain in complex with the class I PDZ binding motif qsav
6BJN · Prkca-binding protein: “PICK1 PDZ domain in complex with the class I PDZ binding motif qsav”. X-ray diffraction. MolNFT v1 #144110 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 6BJN
- Type
- protein
- Length
- 184 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Prkca-binding protein
- UniProt
- Q9NRD5
Structure
x-ray diffraction · 1 distinct chain · 16% helix, 45% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Prkca-binding protein | protein | 92 | 16% helix, 45% strand | Q9NRD5 |
Interfaces
1 interface between chains.
- A–B · 1104 Ų buried · 13 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6BJN · PICK1 PDZ domain in complex with the class I PDZ binding motif QSAV · the same entry in another collection · chain A against A, TM-score 1.00
- Q9NRD5 · AlphaFold monomer V2.0 prediction for prkca-binding protein (Q9NRD5) · a predicted model of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NRD5
- Elsewhere: RCSB PDB 6BJN · PDBe 6BJN · UniProt Q9NRD5
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