MolNFT v1 · #144019 · protein
Linked KDM5A jmj domain bound to the inhibitor 2-((2-chlorophenyl) (PROPOXY)METHYL)-1H-PYRROLO[3,2-B]PYRIDINE (compound N9)
6BGU: “Linked KDM5A jmj domain bound to the inhibitor 2-((2-chlorophenyl) (PROPOXY)METHYL)-1H-PYRROLO[3,2-B]PYRIDINE…”. X-ray diffraction, 3 ligands (DKP, MN, SO4). MolNFT v1 #144019 on GenesisL1: 3D structure, binding sites and pockets in…
- PDB
- 6BGU
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P29375
- Ligands
- DKP, MN, SO4
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 309 | — | P29375 |
Ligands and binding sites
- DKP · 2-[(R)-(2-chlorophenyl)(propoxy)methyl]-1H-pyrrolo[3,2-b]pyridine-7-carboxylic acid · ligand · chains A
- MN · Manganese (II) ion · metal · chains A
- SO4 · Sulfate ion · ion · chains A
- EDO · 1,2-ethanediol · additive · 4 copies · chains A
- GOL · Glycerol · additive · 2 copies · chains A
- DMS · Dimethyl sulfoxide · additive · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P29375
- Elsewhere: RCSB PDB 6BGU · PDBe 6BGU · UniProt P29375
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