MolNFT v1 · #14378 · protein
Candida albicans dihydrofolate reductase complexed with dihydro- nicotinamide-adenine-dinucleotide phosphate (NADPH) and 7-[2-methoxy- 1-(METHOXYMETHYL)ETHYL]-7H-PYRROLO[3,2-F] quinazoline-1,3-diamine (GW557)
1M7A: “Candida albicans dihydrofolate reductase complexed with dihydro- nicotinamide-adenine-dinucleotide phosphate…”. X-ray diffraction, 2 ligands (NDP, MQU), 2 pockets (best druggability 0.76). MolNFT v1 #14378 on GenesisL1: 3D…
- PDB
- 1M7A
- Type
- protein
- Length
- 384 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dihydrofolate reductase
- EC
- 1.5.1.3
- UniProt
- P22906
- Ligands
- NDP, MQU
- Pockets
- 2 · best druggability 0.76
Structure
x-ray diffraction · 1 distinct chain · 24% helix, 35% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Dihydrofolate reductase (EC 1.5.1.3) | protein | 192 | 24% helix, 35% strand | P22906 |
Ligands and binding sites
- NDP · Nadph dihydro-nicotinamide-adenine-dinucleotide phosphate · ligand · 2 copies · chains A, B
- MQU · 7-[2-methoxy-1-(methoxymethyl)ethyl]-7H-pyrrolo[3,2-F] quinazoline-1,3-diamine · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1088 | 0.76 | 0.79 | 92 | NDP, MQU |
| 2 | 444 | 0.67 | 0.79 | 45 | NDP, MQU |
Interfaces
1 interface between chains.
- A–B · 503 Ų buried · 10 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P22906
- Elsewhere: RCSB PDB 1M7A · PDBe 1M7A · UniProt P22906
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