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MolNFT v1 · #143701 · protein

Crystal structure of E.COLI phosphopantetheine adenylyltransferase (PPAT/COAD) in complex with N-((1,3-dimethyl-1H-pyrazol-5-YL)METHYL)- 5-methyl-1H-IMIDAZO[4,5-B]PYRIDIN-2-amine

6B7C: “Crystal structure of E.COLI phosphopantetheine adenylyltransferase (PPAT/COAD) in complex with…”. X-ray diffraction, 3 ligands (CWP, POP, SO4). MolNFT v1 #143701 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
6B7C
Type
protein
Length
318 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P0A6I6
Ligands
CWP, POP, SO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A, B—protein159—P0A6I6

Ligands and binding sites

  • CWP · N-[(1,3-dimethyl-1H-pyrazol-5-yl)methyl]-5-methyl-3H-imidazo[4,5-b]pyridin-2-amine · ligand · 2 copies · chains A, B
  • POP · Pyrophosphate 2- · ligand · 2 copies · chains A, B
  • SO4 · Sulfate ion · ion · 4 copies · chains A, B
  • PEG · Di(hydroxyethyl)ether · additive · 3 copies · chains A, B
  • DMS · Dimethyl sulfoxide · additive · 3 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6B7C · Crystal structure of E.coli Phosphopantetheine Adenylyltransferase (PPAT/CoaD) in complex… · the same entry in another collection · chain A against A, TM-score 1.00
  • P0A6I6 · AlphaFold monomer V2.0 prediction for phosphopantetheine adenylyltransferase (P0A6I6) · a predicted model of the same protein · chain B against A, TM-score 0.98

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