MolNFT v1 · #14343 · DNA
Atomic resolution structure of 5BR-9AMINO-daca with D[CGTACG]2
1M69 · 5'-D(*CP*GP*TP*AP*CP*G)-3': “Atomic resolution structure of 5BR-9AMINO-daca with D[CGTACG]2”. X-ray diffraction, 2 ligands (DAX, SPM). MolNFT v1 #14343 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 1M69
- Type
- DNA
- Length
- 6 nucleotides
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 5'-D(*CP*GP*TP*AP*CP*G)-3'
- Ligands
- DAX, SPM
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 5'-D(*CP*GP*TP*AP*CP*G)-3' | dna | 6 | — | — |
Ligands and binding sites
- DAX · 5-bromo-N[2-(dimethylamino)ethyl]-9-aminoacridine-4-carboxamide · ligand · 2 copies · chains A
- SPM · Spermine · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 1M69 · Atomic Resolution Structure of 5Br-9amino-DACA with d[CGTACG]2 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1M69 · PDBe 1M69
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