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MolNFT v1 · #143024 · protein

Crystal structure of a domain swapped 2,3,4,5-tetrahydropyridine-2,6- dicarboxylate N-succinyltransferase from acinetobacter baumannii

6AMZ · 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N…: “Crystal structure of a domain swapped 2,3,4,5-tetrahydropyridine-2,6- dicarboxylate N-succinyltransferase…”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #143024 on GenesisL1: 3D…

PDB
6AMZ
Type
protein
Length
256 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase
EC
2.3.1.117
UniProt
Q5DL43
Ligands
CA

Structure

x-ray diffraction · 1 distinct chain · 20% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
A2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase (EC 2.3.1.117)protein25620% helix, 28% strandQ5DL43

Ligands and binding sites

  • CA · Calcium ion · metal · chains A
  • MRD · (4R)-2-methylpentane-2,4-diol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6AMZ · Crystal structure of a domain swapped 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate… · the same entry in another collection · chain A against A, TM-score 1.00
  • Q5DL43 · AlphaFold monomer V2.0 prediction for 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate… · a predicted model of the same protein · chain A against A, TM-score 0.70

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