MolNFT v1 · #142670 · protein
Crystal structure of transcription factor from listeria monocytogenes
6ABT · Padr family transcriptional regulator: “Crystal structure of transcription factor from listeria monocytogenes”. X-ray diffraction, 1 pocket (best druggability 0.45). MolNFT v1 #142670 on GenesisL1: 3D structure, binding sites and…
- PDB
- 6ABT
- Type
- protein
- Length
- 196 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Padr family transcriptional regulator
- UniProt
- L8DXR9
- Pockets
- 1 · best druggability 0.45
Structure
x-ray diffraction · 1 distinct chain · 60% helix, 13% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B, A | Padr family transcriptional regulator | protein | 98 | 60% helix, 13% strand | L8DXR9 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.45 | 0.73 | 29 | empty |
Interfaces
1 interface between chains.
- B–A · 864 Ų buried · 7 hydrogen bonds · protein-protein
Compared structures
- 6ABT · Crystal structure of transcription factor from Listeria monocytogenes · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L8DXR9
- Elsewhere: RCSB PDB 6ABT · PDBe 6ABT · UniProt L8DXR9
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