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Crystal structure of transcription factor from listeria monocytogenes

Analyse Crystal structure of transcription factor from listeria monocytogenes in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6ABT
Type: protein
Length: 196 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Padr family transcriptional regulator
UniProt: L8DXR9
Pockets: 1 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 60% helix, 13% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
B, A	Padr family transcriptional regulator	protein	98	60% helix, 13% strand	L8DXR9

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	200	0.45	0.73	29	empty

Interfaces

1 interface between chains.

B–A · 864 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

6ABT · Crystal structure of transcription factor from Listeria monocytogenes · the same entry in another collection · chain B against B, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt L8DXR9
Elsewhere: RCSB PDB 6ABT · PDBe 6ABT · UniProt L8DXR9

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