MolNFT v1 · #142501 · protein

The crystal structure of rat calcium-dependent activator protein for secretion (caps) damh domain

6A68 · Calcium-dependent secretion activator 1: “The crystal structure of rat calcium-dependent activator protein for secretion (caps) damh domain”. X-ray diffraction, 1 ligand (K), 1 pocket (best druggability 0.28). MolNFT v1 #142501 on…

PDB: 6A68
Type: protein
Length: 162 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Calcium-dependent secretion activator 1
UniProt: Q62717
Ligands: K
Pockets: 1 · best druggability 0.28

Structure

x-ray diffraction · 1 distinct chain · 69% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Calcium-dependent secretion activator 1	protein	162	69% helix, 2% strand	Q62717

Ligands and binding sites

K · Potassium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	52	0.28	0.74	12	empty

Modifications

Observed in the structure: 3 modified (engineered).

Compared structures

6A68 · the crystal structure of rat calcium-dependent activator protein for secretion (CAPS)… · the same entry in another collection · chain A against A, TM-score 1.00
Q62717 · AlphaFold monomer V2.0 prediction for calcium-dependent secretion activator 1 (Q62717) · a predicted model of the same protein · chain A against A, TM-score 0.67

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q62717
Elsewhere: RCSB PDB 6A68 · PDBe 6A68 · UniProt Q62717

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