MolNFT v1 · #142015 · protein + DNA
Crystal structure of human topoisomerase II beta in complex with 5- iodouridine-containing-DNA in space group P3221
5ZQF: “Crystal structure of human topoisomerase II beta in complex with 5- iodouridine-containing-DNA in space group…”. X-ray diffraction, 1 ligand (MN). MolNFT v1 #142015 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5ZQF
- Type
- protein + DNA
- Length
- 725 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q02880
- Ligands
- MN
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 708 | — | Q02880 |
| B | — | dna | 8 | — | — |
| C | — | dna | 9 | — | — |
Ligands and binding sites
- MN · Manganese (II) ion · metal · 2 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5ZQF · Crystal structure of human topoisomerase II beta in complex with… · the same entry in another collection · chain A against A, TM-score 1.00
- Q02880 · AlphaFold monomer V2.0 prediction for DNA topoisomerase 2-beta (Q02880) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q02880
- Elsewhere: RCSB PDB 5ZQF · PDBe 5ZQF · UniProt Q02880
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