MolNFT v1 · #140703 · protein
Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae nannochloropsis
5YJ7: “Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae nannochloropsis”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #140703 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YJ7
- Type
- protein
- Length
- 1,944 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CA
Structure
x-ray diffraction · 3 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | — | protein | 483 | — | — |
| B | — | protein | 488 | — | — |
| C | — | protein | 490 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 2 copies · chains A, C
- GOL · Glycerol · additive · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YJ7 · Structural insight into the beta-GH1 glucosidase BGLN1 from oleaginous microalgae… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5YJ7 · PDBe 5YJ7
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