MolNFT v1 · #140668 · protein

Crystal structure of drosophila numb ptb domain and pon peptide complex

5YI8: “Crystal structure of drosophila numb ptb domain and pon peptide complex”. X-ray diffraction. MolNFT v1 #140668 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB: 5YI8
Type: protein
Length: 162 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P16554, Q9W4I7

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	136	—	P16554
B	—	protein	26	—	Q9W4I7

Ligands and binding sites

FMT · Formic acid · additive · chains B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

5YI8 · Crystal structure of drosophila Numb PTB domain and Pon peptide complex · the same entry in another collection · chain A against A, TM-score 1.00
P16554 · AlphaFold monomer V2.0 prediction for protein numb (P16554) · a predicted model of the same protein · chain A against A, TM-score 0.96

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P16554
Every structure of UniProt Q9W4I7
Elsewhere: RCSB PDB 5YI8 · PDBe 5YI8 · UniProt P16554 · UniProt Q9W4I7

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