MolNFT v1 · #140597 · protein
Plasmodium vivax shmt bound with plp-glycine and GS625
5YFY: “Plasmodium vivax shmt bound with plp-glycine and GS625”. X-ray diffraction, 2 ligands (8UL, CL). MolNFT v1 #140597 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5YFY
- Type
- protein
- Length
- 1,329 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- A0A1G4H5I1
- Ligands
- 8UL, CL
Structure
x-ray diffraction · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B, C | — | protein | 443 | — | A0A1G4H5I1 |
Ligands and binding sites
- 8UL · 1-[3-[(4~{S})-6-azanyl-5-cyano-3-methyl-4-propan-2-yl-2~{H}-pyrano[2,3-c]pyrazol-4-yl]-5-fluoranyl-phenyl]piperidine-4-carboxylic acid · ligand · 3 copies · chains A, B, C
- CL · Chloride ion · ion · 2 copies · chains A, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5YFY · Plasmodium vivax SHMT bound with PLP-glycine and GS625 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1G4H5I1
- Elsewhere: RCSB PDB 5YFY · PDBe 5YFY · UniProt A0A1G4H5I1
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