MolNFT v1 · #140378 · protein
Crystal structure of bacillus licheniformis gamma glutamyl transpeptidase with azaserine
5Y8X: “Crystal structure of bacillus licheniformis gamma glutamyl transpeptidase with azaserine”. X-ray diffraction, 1 ligand (CA). MolNFT v1 #140378 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y8X
- Type
- protein
- Length
- 544 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- CA
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 361 | — | — |
| B | — | protein | 183 | — | — |
Ligands and binding sites
- CA · Calcium ion · metal · 3 copies · chains A, B
- GOL · Glycerol · additive · 2 copies · chains A, B
- EDO · 1,2-ethanediol · additive · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y8X · Crystal structure of Bacillus licheniformis Gamma glutamyl transpeptidase with Azaserine · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 5Y8X · PDBe 5Y8X
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