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MolNFT v1 · #140267 · protein

Crystal structure of imp-1 metallo-beta-lactamase

5Y5B: “Crystal structure of imp-1 metallo-beta-lactamase”. X-ray diffraction, 2 ligands (ZN, SO4). MolNFT v1 #140267 on GenesisL1: 3D structure, binding sites and pockets in GL1X.

PDB
5Y5B
Type
protein
Length
221 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
P52699
Ligands
ZN, SO4

Structure

x-ray diffraction · 1 distinct chain.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein221—P52699

Ligands and binding sites

  • ZN · Zinc ion · metal · 2 copies · chains A
  • SO4 · Sulfate ion · ion · chains A
  • EPE · 4-(2-hydroxyethyl)-1-piperazine ethanesulfonic acid · additive · 2 copies · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 5Y5B · Crystal Structure Of IMP-1 Metallo-beta-lactamase · the same entry in another collection · chain A against A, TM-score 1.00
  • P52699 · AlphaFold monomer V2.0 prediction for metallo-beta-lactamase type 2 (P52699) · a predicted model of the same protein · chain A against A, TM-score 0.99

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