MolNFT v1 · #140189 · protein
X-ray structure of acetylcholine binding protein (achbp) complexed with a small molecule
5Y2Q: “X-ray structure of acetylcholine binding protein (achbp) complexed with a small molecule”. X-ray diffraction, 1 ligand (8L3). MolNFT v1 #140189 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5Y2Q
- Type
- protein
- Length
- 999 residues
- Chains
- 5
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- P58154
- Ligands
- 8L3
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| D | — | protein | 203 | — | P58154 |
| A | — | protein | 198 | — | P58154 |
| B | — | protein | 198 | — | P58154 |
| C | — | protein | 200 | — | P58154 |
| E | — | protein | 200 | — | P58154 |
Ligands and binding sites
- 8L3 · 3-[[4-[(3,4-dichlorophenyl)methyl]piperidin-4-yl]methoxy]pyridine · ligand · 5 copies · chains D, A, E, B, C
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5Y2Q · X-ray structure of acetylcholine binding protein (AChBP) complexed with a small molecule · the same entry in another collection · chain E against E, TM-score 1.00
- P58154 · AlphaFold monomer V2.0 prediction for acetylcholine-binding protein (P58154) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P58154
- Elsewhere: RCSB PDB 5Y2Q · PDBe 5Y2Q · UniProt P58154
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