MolNFT v1 · #13980 · RNA
Separate fitting of the anticodon loop region of tRNA (nucleotide 26- 42) in the low resolution cryo-EM MAP of an ef-tu ternary complex (GDP and kirromycin) bound to E. COLI 70S ribosome
1LU3 · Phenylalanine transfer RNA: “Separate fitting of the anticodon loop region of tRNA (nucleotide 26- 42) in the low resolution cryo-EM MAP…”. Electron microscopy, 1 pocket (best druggability 0.38). MolNFT v1 #13980 on GenesisL1: 3D…
- PDB
- 1LU3
- Type
- RNA
- Length
- 17 nucleotides
- Chains
- 1
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Phenylalanine transfer RNA
- Pockets
- 1 · best druggability 0.38
Structure
electron microscopy · 1 distinct chain.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Phenylalanine transfer RNA | rna | 17 | — | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 144 | 0.38 | 0.73 | 15 | empty |
Modifications
Observed in the structure: 1 modified (nucleotide modification).
Compared structures
- 1LU3 · Separate Fitting of the Anticodon Loop Region of tRNA (nucleotide 26-42) in the Low… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 1LU3 · PDBe 1LU3
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