MolNFT v1 · #139766 · protein
Structure of UHRF1 ttd in complex with NV01
5XPI · E3 ubiquitin-protein ligase UHRF1: “Structure of UHRF1 ttd in complex with NV01”. X-ray diffraction, 1 ligand (8C3). MolNFT v1 #139766 on GenesisL1: 3D structure, binding sites and pockets in GL1X.
- PDB
- 5XPI
- Type
- protein
- Length
- 140 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- E3 ubiquitin-protein ligase UHRF1
- EC
- 2.3.2.27
- UniProt
- Q96T88
- Ligands
- 8C3
Structure
x-ray diffraction · 1 distinct chain · 6% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | E3 ubiquitin-protein ligase UHRF1 (EC 2.3.2.27) | protein | 140 | 6% helix, 47% strand | Q96T88 |
Ligands and binding sites
- 8C3 · N-[3-(diethylamino)propyl]-2-(12-methyl-9-oxidanylidene-5-thia-1,10,11-triazatricyclo[6.4.0.0^2, 6]dodeca-2(6),3,7,11-tetraen-10-yl)ethanamide · ligand · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 5XPI · Structure of UHRF1 TTD in complex with NV01 · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q96T88
- Elsewhere: RCSB PDB 5XPI · PDBe 5XPI · UniProt Q96T88
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