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MolNFT v1 · #139454 · protein

Crystal structure of the envz periplasmic domain with chaps

5XGA · Osmolarity sensor protein envz: “Crystal structure of the envz periplasmic domain with chaps”. X-ray diffraction, 1 ligand (CPS), 1 pocket (best druggability 0.45). MolNFT v1 #139454 on GenesisL1: 3D structure, binding sites and…

PDB
5XGA
Type
protein
Length
118 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
Osmolarity sensor protein envz
EC
2.7.13.3
UniProt
P0AEJ4
Ligands
CPS
Pockets
1 · best druggability 0.45

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 27% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AOsmolarity sensor protein envz (EC 2.7.13.3)protein11840% helix, 27% strandP0AEJ4

Ligands and binding sites

  • CPS · 3-[(3-cholamidopropyl)dimethylammonio]-1-propanesulfonate · ligand · 2 copies · chains A
  • ACY · Acetic acid · additive

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

PocketVolume (ų)DruggabilityBuriednessLining residuesInside
1990.450.7913empty

Compared structures

  • 5XGA · Crystal structure of the EnvZ periplasmic domain with CHAPS · the same entry in another collection · chain A against A, TM-score 1.00
  • P0AEJ4 · AlphaFold monomer V2.0 prediction for sensor histidine kinase envz (P0AEJ4) · a predicted model of the same protein · chain A against A, TM-score 0.73

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